Tim Büchner, M.Sc.

Address: | Computer Vision Group Department of Mathematics and Computer Science Friedrich Schiller University of Jena Ernst-Abbe-Platz 2 07743 Jena Germany |
Phone: | +49 (0) 3641 9 46424 |
E-mail: | tim (dot) buechner (at) uni-jena (dot) de |
Room: | 1211 |
Links: |
Curriculum Vitae
Since 2021 | Research Associate at the Computer Vision Group, Friedrich Schiller University Jena |
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2021 | Master Thesis: “A Comparative Analysis of Deep Latent State Space Models” at Computer Vision Group Jena |
2018-2021 | M.Sc. in Computer Science at the Friedrich Schiller University Jena with focus on Computer Vision |
2019 | AI Research assistent at Anatomic Institute 2 at University Hospital Jena |
2018 | Bachelor Thesis: “Repräsentationn, Retrieval und Visualisierung genealogischer Daten” (Representation, retrieval and visualization of genealogic data) at AI Chair at FSU Jena |
2015-2018 | B.Sc. in Computer Science at the Friedrich Schiller University Jena |
Research Interests
- Superresolution with DenseNets
- Time series analysis based on latent space models
- 3D Computer Vision
Publications
2023
Let’s Get the FACS Straight - Reconstructing Obstructed Facial Features
Tim Büchner and Sven Sickert and Gerd F. Volk and Christoph Anders and Orlando Guntinas-Lichius and Joachim Denzler.
International Conference on Computer Vision Theory and Applications (VISAPP). 2023. (accepted)
[bibtex] [abstract]
Tim Büchner and Sven Sickert and Gerd F. Volk and Christoph Anders and Orlando Guntinas-Lichius and Joachim Denzler.
International Conference on Computer Vision Theory and Applications (VISAPP). 2023. (accepted)
[bibtex] [abstract]
The human face is one of the most crucial parts in interhuman communication. Even when parts of the face are hidden or obstructed the underlying facial movements can be understood. Machine learning approaches often fail in that regard due to the complexity of the facial structures. To alleviate this problem a common approach is to fine-tune a model for such a specific application. However, this is computational intensive and might have to be repeated for each desired analysis task. In this paper, we propose to reconstruct obstructed facial parts to avoid the task of repeated fine-tuning. As a result, existing facial analysis methods can be used without further changes with respect to the data. In our approach, the restoration of facial features is interpreted as a style transfer task between different recording setups. By using the CycleGAN architecture the requirement of matched pairs, which is often hard to fullfill, can be eliminated. To proof the viability of our approach, we compare our reconstructions with real unobstructed recordings. We created a novel data set in which 36 test subjects were recorded both with and without 62 surface electromyography sensors attached to their faces. In our evaluation, we feature typical facial analysis tasks, like the computation of Facial Action Units and the detection of emotions. To further assess the quality of the restoration, we also compare perceptional distances. We can show, that scores similar to the videos without obstructing sensors can be achieved.
2022
Surface Electrostimulation Prevents Denervated Muscle Atrophy in Facial Paralysis: Ultrasound Quantification [Abstract]
Gabriel Meincke and Johannes Krauß and Maren Geitner and Dirk Arnold and Anna-Maria Kuttenreich and Valeria Mastryukova and Jan Beckmann and Wengelawit Misikire and Tim Büchner and Joachim Denzler and Orlando Guntinas-Lichius and Gerd F. Volk.
Abstracts of the 2022 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering, including the 14th Vienna International Workshop on Functional Electrical Stimulation. 67 (s1) : pp. 542. 2022. DOI: 10.1515/bmt-2022-2001
[bibtex] [abstract]
Gabriel Meincke and Johannes Krauß and Maren Geitner and Dirk Arnold and Anna-Maria Kuttenreich and Valeria Mastryukova and Jan Beckmann and Wengelawit Misikire and Tim Büchner and Joachim Denzler and Orlando Guntinas-Lichius and Gerd F. Volk.
Abstracts of the 2022 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering, including the 14th Vienna International Workshop on Functional Electrical Stimulation. 67 (s1) : pp. 542. 2022. DOI: 10.1515/bmt-2022-2001
[bibtex] [abstract]
Sparse evidence of the potentialities of surface stimulation (ES) for preventing muscle atrophy in patients with acute or chronic facial palsy have been published so far. Especially studies addressing objective imaging methods for paralysis quantification are currently required. Facial muscles as principal target of ES can be directly quantified via ultrasound, a swiftly feasible imaging method. Our study represents one of the few systematic evaluations of this approach within patients with complete unilateral facial paralysis. Methods A well-established ultrasound protocol for the quantification of area and grey levels was used to evaluate therapeutical effects on patients with facial paralysis using ES. Only patients with complete facial paralysis confirmed by needleelectromyography were included. Individual ES parameters were set during the first visit and confirmed/adapted every month thereafter. At each visit patients additionally underwent facial needle-electromyography to rule out reinnervation as well as ultrasound imaging of 7 facial and 2 chewing muscles. Results In total 15 patients were recruited (medium 53 years, min. 25, max. 78; 8 female, 7 male). They underwent ES for a maximum of 1 year without serious adverse events. All patients were able to follow the ES protocol. First results in the assessment of ultrasound imaging already indicate that electrically stimulated paralytic muscles do not experience any further cross-sectional area decrease in comparison to the contralateral side. Non-stimulated muscles do not provide significant changes. Similar effects on grey levels currently remain to be assessed to draw further conclusions. Conclusion ES is supposed to decelerate the process of atrophy of facial muscles in patients with complete facial paralysis. Thus, the muscular cross-sectional area does not seem to aggravate during the period of electrostimulation within sonographic assessment. This demonstrates the benefit of ES regarding the facial muscle atrophy in patients with complete facial paralysis.
Optical Quantification of Surface Electrical Stimulation to Prevent Denervation Muscle Atrophy in 15 Patients with Facial Paralysis [Abstract]
Johannes Krauß and Gabriel Meincke and Maren Geitner and Dirk Arnold and Anna-Maria Kuttenreich and Valeria Mastryukova and Jan Beckmann and Wengelawit Misikire and Tim Büchner and Joachim Denzler and Orlando Guntinas-Lichius and Gerd F. Volk.
Abstracts of the 2022 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering, including the 14th Vienna International Workshop on Functional Electrical Stimulation. 67 (s1) : pp. 541. 2022. DOI: 10.1515/bmt-2022-2001
[bibtex] [abstract]
Johannes Krauß and Gabriel Meincke and Maren Geitner and Dirk Arnold and Anna-Maria Kuttenreich and Valeria Mastryukova and Jan Beckmann and Wengelawit Misikire and Tim Büchner and Joachim Denzler and Orlando Guntinas-Lichius and Gerd F. Volk.
Abstracts of the 2022 Joint Annual Conference of the Austrian (ÖGBMT), German (VDE DGBMT) and Swiss (SSBE) Societies for Biomedical Engineering, including the 14th Vienna International Workshop on Functional Electrical Stimulation. 67 (s1) : pp. 541. 2022. DOI: 10.1515/bmt-2022-2001
[bibtex] [abstract]
Few studies showing therapeutic potentials of electrical stimulation (ES) of the facial surface in patients with facial palsy have been published so far. Not only muscular atrophy of the facial muscles but facial disfigurement represents the main issue for patient well-being. Therefore, objective methods are required to detect ES effects on facial symmetry within patients with complete unilateral facial paralysis. Methods Only patients with one-sided peripheral complete facial paralysis confirmed by needle-EMG were included and underwent ES twice a day for 20 min until the event of reinnervation or for a maximum of 1 year. ES-parameters were set during the first visit and confirmed/adapted every month thereafter. At each visit, patients underwent needle-electromyography, 2D-fotographic documentation and 3D-videos. Whereas 2D-images allow Euclidean measurements of facial symmetry, 3D-images permit detection of metrical divergence within both sides of face. Using the 2D and 3D-fotographic documentation, we aim to prove that ES is able to prevent muscular atrophy in patients with facial paralysis. Results In total 15 patients were recruited (medium 53 years, min. 25, max. 78; 8 female, 7 male). They underwent ES for a maximum of one year without serious adverse events. All patients were able to follow the ES protocol. On a short term, we could detect positive effects of ES on the extent of asymmetry of mouth corners. Preliminary results show positive effects leading to improvement of symmetry of denervated faces. Conclusion A positive short-term effect of ES on facial symmetry in patients with total paralysis could be shown. The improvement of optical appearance during ES has a positive effect on patients' satisfaction and resembles a promising, easily accessible marker for facial muscles in facial paralysis patients. Improving facial symmetry by ES might also be linked to preventing facial muscle atrophy. Acknowledgements Sponsored by DFG GU-463/12-1 and IZKF
Outcome Prediction and Murmur Detection in Sets of Phonocardiograms by a Deep Learning-Based Ensemble Approach
Sven Festag and Gideon Stein and Tim Büchner and Maha Shadaydeh and Joachim Denzler and Cord Spreckelsen.
Computing in Cardiology (CinC). 2022.
[bibtex] [web] [abstract]
Sven Festag and Gideon Stein and Tim Büchner and Maha Shadaydeh and Joachim Denzler and Cord Spreckelsen.
Computing in Cardiology (CinC). 2022.
[bibtex] [web] [abstract]
We, the team UKJ-FSU, propose a deep learning system for the prediction of congenital heart diseases. Our method is able to predict the clinical outcomes (normal, abnormal) of patients as well as to identify heart murmur (present, absent, unclear) based on phonocardiograms recorded at different auscultation locations. The system we propose is an ensemble of four temporal convolutional networks with identical topologies, each specialized in identifying murmurs and predicting patient outcome from a phonocardiogram taken at one specific auscultation location. Their intermediate outputs are augmented by the manually ascertained patient features such as age group, sex, height and weight. The outputs of the four networks are combined to form a single final decision as demanded by the rules of the George B. Moody PhysioNet Challenge 2022. On the first task of this challenge, the murmur detection, our model reached a weighted accuracy of 0.567 with respect to the unknown validation set. On the outcome prediction task (second task) the ensemble led to a mean outcome cost of 10679. By focusing on the clinical outcome prediction and tuning some of the hyper-parameters only for this task, our model reached a validation score of 9031.
Automatic Objective Severity Grading of Peripheral Facial Palsy Using 3D Radial Curves Extracted from Point Clouds
Tim Büchner and Sven Sickert and Gerd F. Volk and Orlando Guntinas-Lichius and Joachim Denzler.
Challenges of Trustable AI and Added-Value on Health. Pages 179-183. 2022. DOI: 10.3233/SHTI220433
[bibtex] [web] [code] [abstract]
Tim Büchner and Sven Sickert and Gerd F. Volk and Orlando Guntinas-Lichius and Joachim Denzler.
Challenges of Trustable AI and Added-Value on Health. Pages 179-183. 2022. DOI: 10.3233/SHTI220433
[bibtex] [web] [code] [abstract]
Peripheral facial palsy is an illness in which a one-sided ipsilateral paralysis of the facial muscles occurs due to nerve damage. Medical experts utilize visual severity grading methods to estimate this damage. Our algorithm-based method provides an objective grading using 3D point clouds. We extract from static 3D recordings facial radial curves to measure volumetric differences between both sides of the face. We analyze five patients with chronic complete peripheral facial palsy to evaluate our method by comparing changes over several recording sessions. We show that our proposed method allows an objective assessment of facial palsy.